Has anyone implement fingerprint recognition system in Java?
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I have no idea for Java, but I think the main thing in fingerprint recognition is the methodolgy and not the programming language.
You should be able to do it with Neural Networks. You could, for instance, use Joone - Java Object Oriented Neural Engine
Take a look to this open source lib which is well maintained:
sourceafis-java
with the official code repo: https://bitbucket.org/robertvazan/sourceafis-java/src/1ec1cb4f210d?at=default
For example this comes with java api for linux and windows platforms: http://www.griaulebiometrics.com/page/en-us/manual/fingerprint-sdk-java
If you are interested about fingerprint recognition as such, then this book is helpful: http://bias.csr.unibo.it/maltoni/handbook/ For a fast overview, check http://www.cse.unr.edu/~bebis/CS790Q/Lect/BK2_Chapters_1_2.ppt