Is there a quick and simple way to convert HDF5 files to netcdf(4) from the command line in bash? Alternatively a simple script that handle such a conversion automatically in R, NCL or python ?
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with netcdf-c library you can:
$ nccopy in.h5 out.nc
NCL's
ncl_convert2nc
function is my go-to for this type of problem: https://www.ncl.ucar.edu/Document/Tools/ncl_convert2nc.shtmlYou can easily convert hdf5 format data to nedtcdf-4 data by this command which is given below:
Note: this inputfile.h5 data I have got from mosdac website.