The original data is on the google drive. It is a two columns data, t and x. I did the following discrete fft transform. I don't quite understand that the main peak(sharp one) has a lower height than the side one. The second the subplot shows that it is indeed that the sharp peak(most close to 2.0) is the main frequency. The code and the figure is as follows:
import numpy as np
import math
import matplotlib.pyplot as plt
from scipy.fftpack import fft,fftfreq
freqUnit=0.012/(2*np.pi)
data = np.loadtxt(fname='data.txt')
t = data[:,0]
x = data[:,1]
n=len(t)
d=t[1]-t[0]
fig=plt.figure()
ax1=fig.add_subplot(3,1,1)
ax2=fig.add_subplot(3,1,2)
ax3=fig.add_subplot(3,1,3)
y = abs(fft(x))
freqs = fftfreq(n, d)/freqUnit
ax1.plot(t, x)
ax2.plot(t, x)
ax2.set_xlim(40000,60000)
ax2.set_ylim(0.995,1.005)
ax3.plot(freqs,y,'-.')
ax3.set_xlim(0,4)
ax3.set_ylim(0,1000)
plt.show()