nokogiri gem installation error

2019-01-10 06:19发布

问题:

I know there are a lot of questions about this gem but no answer has worked for me.

When I run in SSH gem install nokogiri I get this error:

Extracting libxml2-2.8.0.tar.gz into tmp/x86_64-unknown-linux-gnu/ports/libxml2/2.8.0... OK
Running patch with /home/user58952277/.gem/ruby/1.9.3/gems/nokogiri-1.6.2.1/ports/patches/libxml2/0001-Fix-parser-local-buffers-size-problems.patch...
Running 'patch' for libxml2 2.8.0... ERROR, review 'tmp/x86_64-unknown-linux-gnu/ports/libxml2/2.8.0/patch.log' to see what happened.
*** extconf.rb failed ***
Could not create Makefile due to some reason, probably lack of
necessary libraries and/or headers.  Check the mkmf.log file for more
details.  You may need configuration options.

My host told me that all libs are installed. Here are the full logs after executing the install nokogiri command:

Building native extensions.  This could take a while...
Building nokogiri using packaged libraries.
Building libxml2-2.8.0 for nokogiri with the following patches applied:
    - 0001-Fix-parser-local-buffers-size-problems.patch
    - 0002-Fix-entities-local-buffers-size-problems.patch
    - 0003-Fix-an-error-in-previous-commit.patch
    - 0004-Fix-potential-out-of-bound-access.patch
    - 0005-Detect-excessive-entities-expansion-upon-replacement.patch
    - 0006-Do-not-fetch-external-parsed-entities.patch
    - 0007-Enforce-XML_PARSER_EOF-state-handling-through-the-pa.patch
    - 0008-Improve-handling-of-xmlStopParser.patch
    - 0009-Fix-a-couple-of-return-without-value.patch
    - 0010-Keep-non-significant-blanks-node-in-HTML-parser.patch
    - 0011-Do-not-fetch-external-parameter-entities.patch
************************************************************************
IMPORTANT!  Nokogiri builds and uses a packaged version of libxml2.

If this is a concern for you and you want to use the system library
instead, abort this installation process and reinstall nokogiri as
follows:

    gem install nokogiri -- --use-system-libraries

If you are using Bundler, tell it to use the option:

    bundle config build.nokogiri --use-system-libraries
    bundle install

However, note that nokogiri does not necessarily support all versions
of libxml2.

For example, libxml2-2.9.0 and higher are currently known to be broken
and thus unsupported by nokogiri, due to compatibility problems and
XPath optimization bugs.
************************************************************************
ERROR:  Error installing nokogiri:
    ERROR: Failed to build gem native extension.

        /opt/rubies/ruby-1.9.3/bin/ruby extconf.rb
Building nokogiri using packaged libraries.
checking for iconv.h... yes
checking for iconv_open() in iconv.h... yes
Building libxml2-2.8.0 for nokogiri with the following patches applied:
    - 0001-Fix-parser-local-buffers-size-problems.patch
    - 0002-Fix-entities-local-buffers-size-problems.patch
    - 0003-Fix-an-error-in-previous-commit.patch
    - 0004-Fix-potential-out-of-bound-access.patch
    - 0005-Detect-excessive-entities-expansion-upon-replacement.patch
    - 0006-Do-not-fetch-external-parsed-entities.patch
    - 0007-Enforce-XML_PARSER_EOF-state-handling-through-the-pa.patch
    - 0008-Improve-handling-of-xmlStopParser.patch
    - 0009-Fix-a-couple-of-return-without-value.patch
    - 0010-Keep-non-significant-blanks-node-in-HTML-parser.patch
    - 0011-Do-not-fetch-external-parameter-entities.patch
************************************************************************
IMPORTANT!  Nokogiri builds and uses a packaged version of libxml2.

If this is a concern for you and you want to use the system library
instead, abort this installation process and reinstall nokogiri as
follows:

    gem install nokogiri -- --use-system-libraries

If you are using Bundler, tell it to use the option:

    bundle config build.nokogiri --use-system-libraries
    bundle install

However, note that nokogiri does not necessarily support all versions
of libxml2.

For example, libxml2-2.9.0 and higher are currently known to be broken
and thus unsupported by nokogiri, due to compatibility problems and
XPath optimization bugs.
************************************************************************
Extracting libxml2-2.8.0.tar.gz into tmp/x86_64-unknown-linux-gnu/ports/libxml2/2.8.0... OK
Running patch with /home/user58952277/.gem/ruby/1.9.3/gems/nokogiri-1.6.2.1/ports/patches/libxml2/0001-Fix-parser-local-buffers-size-problems.patch...
Running 'patch' for libxml2 2.8.0... ERROR, review 'tmp/x86_64-unknown-linux-gnu/ports/libxml2/2.8.0/patch.log' to see what happened.
*** extconf.rb failed ***
Could not create Makefile due to some reason, probably lack of
necessary libraries and/or headers.  Check the mkmf.log file for more
details.  You may need configuration options.

Provided configuration options:
    --with-opt-dir
    --without-opt-dir
    --with-opt-include
    --without-opt-include=${opt-dir}/include
    --with-opt-lib
    --without-opt-lib=${opt-dir}/lib
    --with-make-prog
    --without-make-prog
    --srcdir=.
    --curdir
    --ruby=/opt/rubies/ruby-1.9.3/bin/ruby
    --help
    --clean
    --use-system-libraries
    --enable-static
    --disable-static
    --with-zlib-dir
    --without-zlib-dir
    --with-zlib-include
    --without-zlib-include=${zlib-dir}/include
    --with-zlib-lib
    --without-zlib-lib=${zlib-dir}/lib
    --enable-cross-build
    --disable-cross-build
/home/user58952277/.gem/ruby/1.9.3/gems/mini_portile-0.6.0/lib/mini_portile.rb:279:in `block in execute': Failed to complete patch task (RuntimeError)
    from /home/user58952277/.gem/ruby/1.9.3/gems/mini_portile-0.6.0/lib/mini_portile.rb:271:in `chdir'
    from /home/user58952277/.gem/ruby/1.9.3/gems/mini_portile-0.6.0/lib/mini_portile.rb:271:in `execute'
    from extconf.rb:282:in `block in patch'
    from extconf.rb:279:in `each'
    from extconf.rb:279:in `patch'
    from /home/user58952277/.gem/ruby/1.9.3/gems/mini_portile-0.6.0/lib/mini_portile.rb:108:in `cook'
    from extconf.rb:253:in `block in process_recipe'
    from extconf.rb:154:in `tap'
    from extconf.rb:154:in `process_recipe'
    from extconf.rb:419:in `<main>'

回答1:

macOS High Sierra 10.13

gem install nokogiri -- --use-system-libraries=true --with-xml2-include=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.13.sdk/usr/include/libxml2/

macOS Sierra 10.12:

gem install nokogiri -- --use-system-libraries=true --with-xml2-include=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2/

OS X El Capitan 10.11

gem install nokogiri -- --use-system-libraries=true --with-xml2-include=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.11.sdk/usr/include/libxml2/

Consider to add sudo if you don't have permission.


For some reason Apple’s Yosemite version of OSX does not have a system accessible installation of libxml2. Nokogiri requires this in order to compile and luckily Xcode has a version of libxml2 bundled with it — we just need to specify it when installing the gem. It’s important to get Nokogiri installed correctly because as of right now Rails 4.2.1.rc4 automatically attempts to install it and you will feel pain.

Checkout this post for more info.



回答2:

Finally, the problem was caused by nokogiri itself by shipping it's own libxml2 that's incompatible with some systems.
So to install nokogiri I had to tell it that it should use the system libraries.

I installed it manually by:

gem install nokogiri -v 1.6.2.1 -- --use-system-libraries

And it worked well. Other answers didn't solve it.



回答3:

I ran into this same problem, because of an unlisted build dependency. When I found the tmp directory in question:

find ~/.rbenv/ -name patch.log

It said:

sh: patch: command not found

Fixed that with a simple:

sudo yum install -y patch


回答4:

On OSX Yosemite, I did xcode-select --install in a terminal. After which, bundle worked fine with that gem.



回答5:

This works for me in Windows 7 Home Basic 64 Bit:

gem install nokogiri -v 1.6.2.1 -- --use-system-libraries


回答6:

This worked for me with OS X Yosemite.

gem install nokogiri -v 1.6.5 -- --use-system-libraries


回答7:

This is what worked for me on OS X 10.10.3 Yosemite:

sudo gem install nokogiri -- --use-system-libraries --with-xslt-dir=/usr/local/opt/libxslt --with-xml2-include=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.10.sdk/usr/include/libxml2 --with-xml2-lib=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.10.sdk/usr/lib


回答8:

Just Like wongzigii says the install command works with those flags with macOS Sierra

gem install nokogiri -- --use-system-libraries=true --with-xml2-include=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/libxml2/



回答9:

Nothing in current answers worked for me (I use Ubuntu 16.04, not Mac).

However, by following the instructions in Nokogiri site and this part did the trick:

# See http://www.nokogiri.org/tutorials/installing_nokogiri.html#ubuntu___debian
sudo apt-get install build-essential patch
sudo apt-get install ruby-dev zlib1g-dev liblzma-dev

Note I've been using Nokogiri since 2009 and I've always had trouble installing it. Any further comment would probably not comply with SO T&Cs :)



回答10:

Installing Nokogiri in Mac OS El Capitan:

brew install libxml2 bundle config build.nokogiri "--use-system-libraries --with-xml2-include=/usr/local/opt/libxml2/include/libxml2"

bundle install

It working for me :)



回答11:

Nokogiri didn't find Xcode libs on my OSX Sierra machine until I ran:

sudo xcodebuild -license accept



回答12:

This worked for me:

sudo gem install nokogiri -v 'versionNumber'  -- --use-system-libraries --with-xslt-dir=/usr/local/opt/libxslt --with-xml2-include=/Applications/Xcode-beta.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.11.sdk/usr/include/libxml2 --with-xml2-lib=/Applications/Xcode-beta.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.11.sdk/usr/lib


回答13:

Finally after much struggle the following worked for me (OS X 10.8.5, macports). (I am installing github pages i.e. jekyll)

/opt/local/bin/gem install nokogiri -v 1.6.6.2 -- --use-system-libraries --with-xslt-dir=/usr/local/opt/libxslt --with-xml2-include=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.8.sdk/usr/include/libxml2 --with-xml2-lib=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.8.sdk/usr/lib 


回答14:

Am using macOS Sierra.

Went to nokogiri documentation and followed this:

ON MAC OSX

Installation should Just Work™ using Nokogiri’s vendored libxml2 and libxslt.

First, make sure you have the latest version of RubyGems and xcode commandline tools:

1 gem update --system

2 xcode-select --install

Then install nokogiri:

1 gem install nokogiri