I'm using Eclipse Helios. I have a dynamic web project going and I've set up Eclipse to use an Ant Builder to generate a WAR file. This all works fine; if I change a .java file, Eclipse automatically runs my build.xml via Ant and updates my WAR. If I deploy the WAR to an external instance of Tomcat, it works perfectly.
However, when I tell Eclipse to run my project under Tomcat, it is not using the WAR file generated by the Ant build, or using my Ant script to generate a temporary WAR.
I know this because my build.xml script includes some additional XML configuration files in WEB-INF/classes in the WAR that are not ending up in the WEB-INF/classes dir that Eclipse pushes out.
I can't seem to find anything within Eclipse that says "when you publish, use this WAR file instead of building your own".
An alternate approach would be to tell Tomcat when it is building a WAR to do so by adding a list of files, but I can't seem to find a way to do that either.
I'm also curious how Eclipse knows what to publish since it is obviously ignoring my build.xml and my previously-generated WAR file.
Eclipse deploys a web application by looking at the Web Deployment Assembly options for your project. You can see this by right-clicking the project, choosing Properties, and then click on Deployment Assembly. Eclipse usually uses an expanded directory deployment here rather than creating and deploying a WAR (this is based on the server plugin being used, but I think most of them use an expanded directory structure for speed). If you export as a WAR it will create a WAR with the same content.
There are two main choices to do what you'd like:
Modify the Web Deployment Assembly options to match exactly what you would like in the deployed app
Don't use Eclipse's deployment; add an "External Ant Builder" to the "Builders" options for your project (right-click project, choose Properties->Builders). You can then select which targets in the ant file you want to use when eclipse builds the project. One of these options can be a deployment step
I can't seem to find anything within Eclipse that says "when you publish, use this WAR file instead of building your own".
I'm an IntelliJ user, so take this with a grain of salt. But...
Right-click on the Project Explorer target/foo.war, select Mark Deployable.
Then right-click on the foo.war file again and Run As... -> Run On Server...
Choose the JBoss instance.
If you go to the Servers view, you'll now see your WAR file under the JBoss instance as /proj_root/target/foo.war
Oh Eclipse, sigh...