I am trying to use .xlsx library but function write.xlsx is returning error that such can not be found.
When I am installing library(xlsx) in log I can read:
Error : .onLoad nie powiodło się w funkcji 'loadNamespace()' dla pakietu 'rJava', szczegóły:
wywołanie: fun(libname, pkgname)
błąd: No CurrentVersion entry in Software/JavaSoft registry! Try re-installing Java and make sure R and Java have matching architectures.
In addition: Warning messages:
1: pakiet ‘xlsx’ został zbudowany w wersji R 3.3.2
2: pakiet ‘rJava’ został zbudowany w wersji R 3.3.3
Error: pakiet ‘rJava’ nie mógł zostać załadowany
Java is up to date.
There are at least three sets of R packages used for working with Excel files, including:
- xlsx -- requires rJava package
- openxlsx -- does not require rJava package
- readxl / writexl -- does not require rJava package
For options 2 and 3, the solution is simply to use install.packages()
to install the desired package (as noted in another answer by @Linus), once you've updated R to the latest version.
install.packages("openxlsx")
library(openxlsx)
or
install.packages(c("readxl","writexl"))
library(readxl)
library(writexl)
A Working Example: Write to Excel File
library(writexl)
data <- data.frame(matrix(runif(100),nrow=10,ncol=10))
write_xlsx(data,"./data/simpleExcel.xlsx")
...and the output:
If You Must Use rJava...
Unfortunately, option 1 is considerably more complicated than "install Java." If one must use xlsx
or needs the rJava
package to support other R packages, installation of Java varies significantly by operating system.
Windows: one must install a version of Java whose architecture is compatible with R (i.e. 32-bit vs. 64-bit). One may consider installing both 32-bit and 64-bit versions because some Windows programs installed on the computer may require 32-bit Java vs. 64-bit. With RStudio, one can configure R to use the 32-bit version of R if only 32-bit Java is installed on the machine.
Mac OS X: one must install Java and run a series of commands that are documented on the rJava Issues GitHub page, including executing an R script to reconfigure Java for R.
Linux: one needs to install Java using the package installer tool appropriate for the version of Linux, and then configure R to use it. For example, in Ubuntu one would install with the advanced packaging tool.
sudo apt-get install openjdk-8-jdk # openjdk-9-jdk has some installation issues
sudo R CMD javareconf
xlsx needs Java. Please install the current Java version from https://www.java.com/de/
and watch out, that both R and java are either 32bit or 64bit as it is stated in the error message
... and make sure R and Java have matching architectures.
Or use writexls or openxlsx. They are not depending on Java (Thanks @Len)