我设置了计算机视觉项目,以检测和处理GFP蛋白质。 我一直对不是我的文件TIFF图像和字节错误得到错误。 我不太明白他们的意思,并没有发现任何关于它的在线。
我已经确信,文件路径是正确的,并试图改变文件转换成TIFF格式。 现在在Finder中,它说,它是一个TIFF图像,但仍然给出了一个错误。
import tifffile
from colicoords import Data, Cell, CellPlot
import matplotlib.pyplot as plt
binary_img = tifffile.imread('organoid_images/gfp/cells1.tif')
data = Data()
data.add_data(binary_img, 'binary')
cell = Cell(data)
cell.optimize()
cp = CellPlot(cell)
plt.figure()
cp.imshow('flu_514', cmap='viridis', interpolation='nearest')
cp.plot_outline()
cp.plot_midline()
plt.show()
错误信息:
Traceback (most recent call last):
File "/Users/CosmoCrash/opencvblobs/lib/python3.7/site-packages/tifffile/tifffile.py", line 2236, in __init__
byteorder = {b'II': '<', b'MM': '>'}[header[:2]]
KeyError: b'\x89P'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "gfp.py", line 6, in <module>
binary_img = tifffile.imread('organoid_images/gfp/cells1.tif')
File "/Users/CosmoCrash/opencvblobs/lib/python3.7/site-packages/tifffile/tifffile.py", line 715, in imread
with TiffFile(files, **kwargs_file) as tif:
File "/Users/CosmoCrash/opencvblobs/lib/python3.7/site-packages/tifffile/tifffile.py", line 2238, in __init__
raise TiffFileError('not a TIFF file')
tifffile.tifffile.TiffFileError: not a TIFF file