Rollup issue: resolve failed, mootools already loa

I'm having an error that makes absolutely no sense. I haven't run rollup -c in about an month and running it now is causing all sorts of mayhem.

1) `mootools` already loaded

Why on earth is mootools already loaded in the log of this error? What is using mootools?

2) How is rolllup triggering ava?

If you scroll all the way at the bottom, I keen getting this random issue complaining that the bin itself needs to be run with ava.

Test files must be run with the AVA CLI: `ava node_modules/.bin/rollup`

3) Apparently missing `dependencies`.

The script is complaining about babel-runtime, n, foreman which is odd because I installed all of these. Just to make sure.

4) I've changed the `entry`

I've cleared the entry file to not contain any dependencies itself and the same errors still happen.

Here's my config:

module.exports = {
  external: [],
  entry: './src/appProxypass/index.js',
  dest: './packages/proxypass-app/index.js',
  format: 'cjs',
  plugins: [
    require('rollup-plugin-commonjs')({
    }),
    require('rollup-plugin-babel')({
      babelrc: false,
      runtimeHelpers: true,
      // externalHelpers: true,
      'presets': [
        'es2015-rollup',
        'stage-2'
      ],
      'plugins': [
        'transform-runtime',
        'transform-async-to-generator',
        'syntax-async-functions',
        'transform-flow-strip-types',
        'transform-class-properties'
      ],
      exclude: 'node_modules/**'
    }),
    require('rollup-plugin-cleanup')()
  ]
}

Here's my errors:

> rollup -c

resolve failed:  { Error: Cannot find module 'n'
    at Function.Module._resolveFilename (module.js:472:15)
    at Function.requireRelative.resolve (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/node_modules/modify-babel-preset/node_modules/require-relative/index.js:30:17)
    at resolve (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/node_modules/modify-babel-preset/lib/serialize.js:25:26)
    at findAndRemove (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/node_modules/modify-babel-preset/lib/serialize.js:67:11)
    at /Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/node_modules/modify-babel-preset/lib/serialize.js:111:13
    at Array.map (native)
    at loadPreset (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/node_modules/modify-babel-preset/lib/serialize.js:103:29)
    at module.exports (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/node_modules/modify-babel-preset/index.js:97:19)
    at Object.<anonymous> (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/index.js:3:18)
    at Module._compile (module.js:573:32)
    at Object.Module._extensions..js (module.js:582:10)
    at Module.load (module.js:490:32)
    at tryModuleLoad (module.js:449:12)
    at Function.Module._load (module.js:441:3)
    at Module.require (module.js:500:17)
    at require (internal/module.js:20:19)
    at /Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/rollup-plugin-babel/node_modules/babel-core/lib/transformation/file/options/option-manager.js:302:17
    at Array.map (native)
    at OptionManager.resolvePresets (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/rollup-plugin-babel/node_modules/babel-core/lib/transformation/file/options/option-manager.js:270:20)
    at OptionManager.mergePresets (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/rollup-plugin-babel/node_modules/babel-core/lib/transformation/file/options/option-manager.js:259:10)
    at OptionManager.mergeOptions (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/rollup-plugin-babel/node_modules/babel-core/lib/transformation/file/options/option-manager.js:244:14)
    at OptionManager.init (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/rollup-plugin-babel/node_modules/babel-core/lib/transformation/file/options/option-manager.js:374:12) code: 'MODULE_NOT_FOUND' } n
mootools already loaded
resolve failed:  { Error: Cannot find module 'foreman'
    at Function.Module._resolveFilename (module.js:472:15)
    at Function.requireRelative.resolve (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/node_modules/modify-babel-preset/node_modules/require-relative/index.js:30:17)
    at resolve (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/node_modules/modify-babel-preset/lib/serialize.js:25:26)
    at findAndRemove (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/node_modules/modify-babel-preset/lib/serialize.js:67:11)
    at /Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/node_modules/modify-babel-preset/lib/serialize.js:111:13
    at Array.map (native)
    at loadPreset (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/node_modules/modify-babel-preset/lib/serialize.js:103:29)
    at module.exports (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/node_modules/modify-babel-preset/index.js:97:19)
    at Object.<anonymous> (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/index.js:3:18)
    at Module._compile (module.js:573:32)
    at Object.Module._extensions..js (module.js:582:10)
    at Module.load (module.js:490:32)
    at tryModuleLoad (module.js:449:12)
    at Function.Module._load (module.js:441:3)
    at Module.require (module.js:500:17)
    at require (internal/module.js:20:19)
    at /Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/rollup-plugin-babel/node_modules/babel-core/lib/transformation/file/options/option-manager.js:302:17
    at Array.map (native)
    at OptionManager.resolvePresets (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/rollup-plugin-babel/node_modules/babel-core/lib/transformation/file/options/option-manager.js:270:20)
    at OptionManager.mergePresets (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/rollup-plugin-babel/node_modules/babel-core/lib/transformation/file/options/option-manager.js:259:10)
    at OptionManager.mergeOptions (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/rollup-plugin-babel/node_modules/babel-core/lib/transformation/file/options/option-manager.js:244:14)
    at OptionManager.init (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/rollup-plugin-babel/node_modules/babel-core/lib/transformation/file/options/option-manager.js:374:12) code: 'MODULE_NOT_FOUND' } foreman
resolve failed:  { Error: Cannot find module 'babel-runtime'
    at Function.Module._resolveFilename (module.js:472:15)
    at Function.requireRelative.resolve (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/node_modules/modify-babel-preset/node_modules/require-relative/index.js:30:17)
    at resolve (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/node_modules/modify-babel-preset/lib/serialize.js:25:26)
    at findAndRemove (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/node_modules/modify-babel-preset/lib/serialize.js:67:11)
    at /Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/node_modules/modify-babel-preset/lib/serialize.js:111:13
    at Array.map (native)
    at loadPreset (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/node_modules/modify-babel-preset/lib/serialize.js:103:29)
    at module.exports (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/node_modules/modify-babel-preset/index.js:97:19)
    at Object.<anonymous> (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/babel-preset-es2015-rollup/index.js:3:18)
    at Module._compile (module.js:573:32)
    at Object.Module._extensions..js (module.js:582:10)
    at Module.load (module.js:490:32)
    at tryModuleLoad (module.js:449:12)
    at Function.Module._load (module.js:441:3)
    at Module.require (module.js:500:17)
    at require (internal/module.js:20:19)
    at /Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/rollup-plugin-babel/node_modules/babel-core/lib/transformation/file/options/option-manager.js:302:17
    at Array.map (native)
    at OptionManager.resolvePresets (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/rollup-plugin-babel/node_modules/babel-core/lib/transformation/file/options/option-manager.js:270:20)
    at OptionManager.mergePresets (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/rollup-plugin-babel/node_modules/babel-core/lib/transformation/file/options/option-manager.js:259:10)
    at OptionManager.mergeOptions (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/rollup-plugin-babel/node_modules/babel-core/lib/transformation/file/options/option-manager.js:244:14)
    at OptionManager.init (/Users/thomasreggi/Desktop/PAS/PAS-api/node_modules/rollup-plugin-babel/node_modules/babel-core/lib/transformation/file/options/option-manager.js:374:12) code: 'MODULE_NOT_FOUND' } babel-runtime

Test files must be run with the AVA CLI:

    $ ava node_modules/.bin/rollup

Issue has something to do with rollup-plugin-babel. I removed it, and I'm using rollup on the lib version (built) rather then the src.

module.exports = {
  external: [],
  entry: './lib/appProxypass/index.js',
  dest: './packages/proxypass-app/index.js',
  format: 'cjs',
  plugins: [
    require('rollup-plugin-commonjs')(),
    require('rollup-plugin-cleanup')()
  ]
}