GGPLOT2 aes_string()未办理名称以数字或包含空格(ggplot2 aes_stri

2019-07-03 22:24发布

如果的列名data.frame都开始使用数字或有空格, aes_string()无法处理它们:

foo=data.frame("1st Col"=1:5, "2nd Col"=5:1, check.names=F)
bar=colnames(foo)
ggplot(foo, aes_string(x=bar[1],y=bar[2])) + geom_point()
# Error in parse(text = x) : <text>:1:2: unexpected symbol
# 1: 1st
#     ^

foo=data.frame("First Col"=1:5, "Second Col"=5:1, check.names=F)
bar=colnames(foo)
ggplot(foo, aes_string(x=bar[1],y=bar[2])) + geom_point()
# Error in parse(text = x) : <text>:1:7: unexpected symbol
# 1: First Col
#          ^

foo=data.frame("First_Col"=1:5, "Second_Col"=5:1, check.names=F)
bar=colnames(foo)
ggplot(foo, aes_string(x=bar[1],y=bar[2]))+geom_point()
# Now it works

有没有办法有在列名的空间,或者他们开始​​用数字,我们可以在GGPLOT2使用它们? 请考虑我们可能不知道列名,因此,应避免提供的例子具有恒定的列名 - 类似下面:

aes_string(x=`1st Col`, y=`2nd Col`)

Answer 1:

据我所知,此方法应编程工作:

foo=data.frame("1st Col"=1:5, "2nd Col"=5:1, check.names=F)

#Save the colnames
bar=colnames(foo)

#change the names to something usable
names(foo) <- c("col1", "col2")

#Plot with arbitrary labs
ggplot(foo, aes(x=col1, y=col2)) + geom_point()+
  labs(x=bar[1], y=bar[2])



Answer 2:

原来的问题询问如何修改变量的值,因此是可以接受的ggplot()当值不事先知道。

编写一个函数,增加了背蜱开始和变量的值的结尾:

# ggName -> changes a string so it is enclosed in back-ticks.
#   This can be used to make column names that have spaces (blanks)
#   or non-letter characters acceptable to ggplot2.
#   This version of the function is vectorized with sapply.
ggname <- function(x) {
    if (class(x) != "character") {
        return(x)
    }
    y <- sapply(x, function(s) {
        if (!grepl("^`", s)) {
            s <- paste("`", s, sep="", collapse="")
        }
        if (!grepl("`$", s)) {
            s <- paste(s, "`", sep="", collapse="")
        }
    }
    )
    y 
}

例子:

ggname(12)

[1] 12

ggname("awk ward")

“`AWK ward`”

l <- c("awk ward", "no way!")
ggname(l)

“`AWK ward`” “`没办法!'”



Answer 3:

您可以使用该功能aes_string2下方,而不是aes_string

aes_string2 <- function(...){
  args <- lapply(list(...), function(x) sprintf("`%s`", x))
  do.call(aes_string, args)
}


Answer 4:

我有类似的情况,我用``使其明白:

mydf$ROIs <- row.names(mydf)
df.long <- melt(mydf)
colnames(df.long)[3] <- "Methods"
colnames(df.long)[4] <- "Mean L2 Norm Error"
variable.name="Variable", na.rm=TRUE)
ggplot(df.long, aes(ROIs, `Mean L2 Norm Error`, fill=Methods))+  
geom_bar(stat="identity",position="dodge")+
theme(axis.text.x=element_text(angle=45,hjust=1,vjust=1))


文章来源: ggplot2 aes_string() fails to handle names starting with numbers or containing spaces
标签: r ggplot2